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Genus Pedobacter

Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow () only indicates the sequence of valid publication of names and does not mean that the last name in the sequence must be used (see: Introduction).

Number of species cited in this file: 67
Number of subspecies cited in this file: 0

Classification (Warning: see also the file "Classification of prokaryotes: Introduction").


For a detailed description of this taxon see Bergey’s Manual of Systematics of Archaea and Bacteria (BMSAB).


 

Pedobacter Steyn et al. 1998, gen. nov.
Type species: ¤ Pedobacter heparinus (Payza and Korn 1956) Steyn et al. 1998.
Etymology: Gr. n. pedon, the ground, earth; N.L. masc. n. bacter, rod; N.L. masc. n. Pedobacter, rod from soil.
Valid publication: STEYN (P.L.), SEGERS (P.), VANCANNEYT (M.), SANDRA (P.), KERSTERS (K.) and JOUBERT (J.J.): Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae. Int. J. Syst. Bacteriol., 1998, 48, 165-177.
Original article in IJSEM Online

Pedobacter Steyn et al. 1998 emend. Vanparys et al. 2005.
Reference: VANPARYS (B.), HEYLEN (K.), LEBBE (L.) and DE VOS (P.): Pedobacter caeni sp. nov., a novel species isolated from a nitrifying inoculum. Int. J. Syst. Evol. Microbiol., 2005, 55, 1315-1318.
Original article in IJSEM Online

Pedobacter Steyn et al. 1998 emend. Hwang et al. 2006.
Reference: HWANG (C.Y.), CHOI (D.H.) and CHO (B.C.): Pedobacter roseus sp. nov., isolated from a hypertrophic pond, and emended description of the genus Pedobacter. Int. J. Syst. Evol. Microbiol., 2006, 56, 1831-1836.
Original article in IJSEM Online

Pedobacter Steyn et al. 1998 emend. Gallego et al. 2006.
Reference: GALLEGO (V.), GARCÍA (M.T.) and VENTOSA (A.): Pedobacter aquatilis sp. nov., isolated from drinking water, and emended description of the genus Pedobacter. Int. J. Syst. Evol. Microbiol., 2006, 56, 1853-1858.
Original article in IJSEM Online

Pedobacter Steyn et al. 1998 emend. Zhou et al. 2012.
Reference: ZHOU (Z.), JIANG (F.), WANG (S.), PENG (F.), DAI (J.), LI (W.) and FANG (C.): Pedobacter arcticus sp. nov., a facultative psychrophile isolated from Arctic soil, and emended descriptions of the genus Pedobacter, Pedobacter heparinus, Pedobacter daechungensis, Pedobacter terricola, Pedobacter glucosidilyticus and Pedobacter lentus. Int. J. Syst. Evol. Microbiol., 2012, 62, 1963-1969.
Original article in IJSEM Online

Pedobacter Steyn et al. 1998 emend. Zhou et al. 2012 emend. Farfán et al. 2014.
Reference: FARFÁN, M., MONTES, M. J. and MARQUÉS, A. M. 2014. Reclassification of Sphingobacterium antarcticum Shivaji et al. 1992 as Pedobacter antarcticus comb. nov. and Pedobacter piscium (Takeuchi and Yokota 1993) Steyn et al. 1998 as a later heterotypic synonym of Pedobacter antarcticus. Int. J. Syst. Evol. Microbiol., 64, 863-868.
Original article.

Pedobacter Steyn et al. 1998 emend. Zhou et al. 2012 emend. Farfán et al. 2014 emend. Du et al. 2015.
Reference: DU, J., SINGH, H., NGO, H. T., WON, K. H., KIM, K. Y. and YI, T. H. 2015. Pedobacter daejeonensis sp. nov. and Pedobacter trunci sp. nov., isolated from an ancient tree trunk, and emended description of the genus Pedobacter. Int. J. Syst. Evol. Microbiol., 65, 1241-1246.
Original article.

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Pedobacter africanus Steyn et al. 1998, sp. nov.
Type strain: (see also StrainInfo.net) CCUG 39353 = CIP 105499 = LMG 10353 = NBRC 100065.
Sequence accession no. (16S rRNA gene) for the type strain: AJ438171.
Etymology: L. masc. adj. africanus, of or belonging to Africa, the source of isolation.
Valid publication: STEYN (P.L.), SEGERS (P.), VANCANNEYT (M.), SANDRA (P.), KERSTERS (K.) and JOUBERT (J.J.): Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae. Int. J. Syst. Bacteriol., 1998, 48, 165-177.
Original article in IJSEM Online

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Pedobacter agri Roh et al. 2008, sp. nov.
Type strain: (see also StrainInfo.net) PB92 = DSM 19486 = JCM 15120 = KCTC 12511.
Sequence accession no. (16S rRNA gene) for the type strain: EF660751.
Etymology: L. gen. n. agri, of a field.
Valid publication: ROH (S.W.), QUAN (Z.X.), NAM (Y.D.), CHANG (H.W.), KIM (K.H.), KIM (M.K.), IM (W.T.), JIN (L.), KIM (S.H.), LEE (S.T.) and BAE (J.W.): Pedobacter agri sp. nov., from soil. Int. J. Syst. Evol. Microbiol., 2008, 58, 1640-1643.
Original article in IJSEM Online

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Pedobacter alluvionis Gordon et al. 2009, sp. nov.
Type strain: (see also StrainInfo.net) NWER-II11 = DSM 19624 = LMG 24258.
Sequence accession no. (16S rRNA gene) for the type strain: EU030688.
Etymology: L. gen. n. alluvionis, of alluvial land.
Valid publication: GORDON (N.S.), VALENZUELA (A.), ADAMS (S.M.), RAMSEY (P.W.), POLLOCK (J.L.), HOLBEN (W.E.) and GANNON (J.E.): Pedobacter nyackensis sp. nov., Pedobacter alluvionis sp. nov. and Pedobacter borealis sp. nov., isolated from Montana flood-plain sediment and forest soil. Int. J. Syst. Evol. Microbiol., 2009, 59, 1720-1726.
Original article in IJSEM Online

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Pedobacter alpinus Li et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) RSP19=CGMCC 1.14040=KCTC 42456=NBRC 110967.
Sequence accession no. (16S rRNA) for the type strain: KP008109.
Etymology: L. masc. adj. alpinus, alpine, referring to the isolation of the type strain from an alpine environment.
Source: Environmental - freshwater.
Valid publication: LI, A. H., LIU, H. C. and ZHOU, Y. G. 2015. Pedobacter alpinus sp. nov., isolated from a plateau lake. Int. J. Syst. Evol. Microbiol., 65, 3782-3787.
Original article in IJSEM Online

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Pedobacter antarcticus ( Shivaji et al. 1992) Farfán et al. 2014, comb. nov.
Type strain: (see also StrainInfo.net) 4BY=ATCC 51969=MTCC 675.
Sequence accession no. (16S rRNA) for the type strain: HM448033.
Whole-genome sequence accession no. for the type strain: N/A.
Basonym: ¤ Sphingobacterium antarcticum corrig. Shivaji et al. 1992
Later heterotypic synonym: ¤ Pedobacter piscium (corrig. Shivaji et al. 1992) Farfán et al. 2014, comb. nov.
Etymology: L. masc. adj. antarcticus, pertaining to Antarctica.
Source: Environmental - soil.
Valid publication: FARFÁN, M., MONTES, M. J. and MARQUÉS, A. M. 2014. Reclassification of Sphingobacterium antarcticum Shivaji et al. 1992 as Pedobacter antarcticus comb. nov. and Pedobacter piscium (Takeuchi and Yokota 1993) Steyn et al. 1998 as a later heterotypic synonym of Pedobacter antarcticus. Int. J. Syst. Evol. Microbiol., 64, 863-868.
Original article in IJSEM Online

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Pedobacter aquatilis Gallego et al. 2006, sp. nov.
Type strain: (see also StrainInfo.net) AR107 = CCM 7347 = CECT 7114 = JCM 13454.
Sequence accession no. (16S rRNA gene) for the type strain: AM114396.
Etymology: L. masc. adj. aquatilis, aquatic, growing in water.
Valid publication: GALLEGO (V.), GARCÍA (M.T.) and VENTOSA (A.): Pedobacter aquatilis sp. nov., isolated from drinking water, and emended description of the genus Pedobacter. Int. J. Syst. Evol. Microbiol., 2006, 56, 1853-1858.
Original article in IJSEM Online

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Pedobacter arcticus Zhou et al. 2012, sp. nov.
Type strain: (see also StrainInfo.net) A12 = CCTCC AB 2010223 = NRRL B-59457.
Sequence accession no. (16S rRNA gene) for the type strain: HM051286.
Etymology: L. masc. adj. arcticus, northern, Arctic, the place of origin of the type strain.
Valid publication: ZHOU (Z.), JIANG (F.), WANG (S.), PENG (F.), DAI (J.), LI (W.) and FANG (C.): ZHOU (Z.), JIANG (F.), WANG (S.), PENG (F.), DAI (J.), LI (W.) and FANG (C.): Pedobacter arcticus sp. nov., a facultative psychrophile isolated from Arctic soil, and emended descriptions of the genus Pedobacter, Pedobacter heparinus, Pedobacter daechungensis, Pedobacter terricola, Pedobacter glucosidilyticus and Pedobacter lentus. Int. J. Syst. Evol. Microbiol., 2012, 62, 1963-1969.
Original article in IJSEM Online

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Pedobacter ardleyensis Da et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) R2-28=CCTCC AB 2013365=LMG 28255.
Sequence accession no. (16S rRNA) for the type strain: KJ631640.
Etymology: N.L. masc. adj. ardleyensis, from Ardley Island, referring to the site where the type strain was isolated.
Source: Environmental - soil.
Valid publication: DA, X., JIANG, F., CHANG, X., REN, L., QIU, X., KAN, W., ZHANG, Y., DENG, S., FANG, C. and PENG, F. 2015. Pedobacter ardleyensis sp. nov., isolated from soil in Antarctica. Int. J. Syst. Evol. Microbiol., 65, 3841-3846.
Original article in IJSEM Online

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Pedobacter bauzanensis Zhang et al. 2010, sp. nov.
Type strain: (see also StrainInfo.net) BZ42 = CGMCC 1.10187 = CIP 110134 = DSM 22554.
Sequence accession no. (16S rRNA gene) for the type strain: GQ161990.
Etymology: M.L. masc. adj. bauzanensis, referring to Bauzanum, the medieval Latin name for Bozen/Bolzano, a city in South Tyrol, Italy, where the species was first found.
Valid publication: ZHANG (D.C.), SCHINNER (F.) and MARGESIN (R.): Pedobacter bauzanensis sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol., 2010, 60, 2592-2595.
Original article in IJSEM Online

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Pedobacter borealis Gordon et al. 2009, sp. nov.
Type strain: (see also StrainInfo.net) G-1 = DSM 19626 = LMG 24259.
Sequence accession no. (16S rRNA gene) for the type strain: EU030687.
Etymology: L. masc. adj. borealis, related to the north, boreal.
Valid publication: GORDON (N.S.), VALENZUELA (A.), ADAMS (S.M.), RAMSEY (P.W.), POLLOCK (J.L.), HOLBEN (W.E.) and GANNON (J.E.): Pedobacter nyackensis sp. nov., Pedobacter alluvionis sp. nov. and Pedobacter borealis sp. nov., isolated from Montana flood-plain sediment and forest soil. Int. J. Syst. Evol. Microbiol., 2009, 59, 1720-1726.
Original article in IJSEM Online

Note: The epithet borealis is a Latin adjective, not a neo-Latin adjective as cited in the paper by Gordon et al. 2009.

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Pedobacter boryungensis Jung et al. 2012, sp. nov.
Type strain: (see also StrainInfo.net) BR-9 = CCUG 60024 = KCTC 23344.
Sequence accession no. (16S rRNA gene) for the type strain: HM640986.
Etymology: N.L. masc. adj. boryungensis, of or pertaining to Boryung, the Korean city from where the type strain was isolated.
Valid publication: JUNG (Y.T.), LEE (S.Y.), CHOI (W.C.), OH (T.K.) and YOON (J.H.): Pedobacter boryungensis sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol., 2012, 62, 13-17.
Original article in IJSEM Online

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Pedobacter caeni Vanparys et al. 2005, sp. nov.
Type strain: (see also StrainInfo.net) DSM 16990 = LMG 22862.
Sequence accession no. (16S rRNA gene) for the type strain: AJ786798.
Etymology: L. gen. neut. n. caeni, of sludge.
Valid publication: VANPARYS (B.), HEYLEN (K.), LEBBE (L.) and DE VOS (P.): Pedobacter caeni sp. nov., a novel species isolated from a nitrifying inoculum. Int. J. Syst. Evol. Microbiol., 2005, 55, 1315-1318.
Original article in IJSEM Online

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Pedobacter composti Lee et al. 2009, sp. nov.
Type strain: (see also StrainInfo.net) TR6-06 = KCTC 12638 = LMG 23490.
Sequence accession no. (16S rRNA gene) for the type strain: AB267720.
Etymology: N.L. gen. n. composti, of compost.
Valid publication: LEE (H.G.), KIM (S.G.), IM (W.T.), OH (H.M.) and LEE (S.T.): Pedobacter composti sp. nov., isolated from compost. Int. J. Syst. Evol. Microbiol., 2009, 59, 345-349.
Original article in IJSEM Online

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Pedobacter cryoconitis Margesin et al. 2003, sp. nov.
Type strain: (see also StrainInfo.net) A37 = DSM 14825 = LMG 21415.
Sequence accession no. (16S rRNA gene) for the type strain: AJ438170.
Etymology: N.L. gen. n. cryoconitis, from cryoconite, referring to glacier cryoconite, where the strain was first found.
Valid publication: MARGESIN (R.), SPRÖER (C.), SCHUMANN (P.) and SCHINNER (F.): Pedobacter cryoconitis sp. nov., a facultative psychrophile from alpine glacier cryoconite. Int. J. Syst. Evol. Microbiol., 2003, 53, 1291-1296.
Original article in IJSEM Online

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Pedobacter daechungensis An et al. 2009, sp. nov.
Type strain: (see also StrainInfo.net) Dae 13 = KCTC 12637 = LMG 23489.
Sequence accession no. (16S rRNA gene) for the type strain: AB267722.
Etymology: N.L. masc. adj. daechungensis, pertaining to Daechung lake.
Valid publication: AN (D.S.), KIM (S.G.), TEN (L.N.) and CHO (C.H.): Pedobacter daechungensis sp. nov., from freshwater lake sediment in South Korea. Int. J. Syst. Evol. Microbiol., 2009, 59, 69-72.
Original article in IJSEM Online

Pedobacter daechungensis An et al. 2009 emend. Zhou et al. 2012.
Reference: ZHOU (Z.), JIANG (F.), WANG (S.), PENG (F.), DAI (J.), LI (W.) and FANG (C.): Pedobacter arcticus sp. nov., a facultative psychrophile isolated from Arctic soil, and emended descriptions of the genus Pedobacter, Pedobacter heparinus, Pedobacter daechungensis, Pedobacter terricola, Pedobacter glucosidilyticus and Pedobacter lentus. Int. J. Syst. Evol. Microbiol., 2012, 62, 1963-1969.
Original article in IJSEM Online

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Pedobacter daejeonensis Du et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) THG-DN3.18=KCTC 42230=JCM 30352.
Sequence accession no. (16S rRNA) for the type strain: KM035945.
Whole-genome sequence accession no. for the type strain: -.
Etymology: N.L. masc. adj. daejeonensis, pertaining to Daejeon, a city in Korea, from where the type strain was isolated.
Source: Plant.
Valid publication: DU, J., SINGH, H., NGO, H. T., WON, K. H., KIM, K. Y. and YI, T. H. 2015. Pedobacter daejeonensis sp. nov. and Pedobacter trunci sp. nov., isolated from an ancient tree trunk, and emended description of the genus Pedobacter. Int. J. Syst. Evol. Microbiol., 65, 1241-1246.
Original article in IJSEM Online

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Pedobacter duraquae Muurholm et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) WB 2.1-25 = CIP 109481 = DSM 19034.
Sequence accession no. (16S rRNA gene) for the type strain: AM491368.
Etymology: L. adj. durus, hard; L. fem. n. aqua, water; N.L. gen. fem. n. duraquae, from/of hard water.
Valid publication: MUURHOLM (S.), COUSIN (S.), PÄUKER (O.), BRAMBILLA (E.) and STACKEBRANDT (E.): Pedobacter duraquae sp. nov., Pedobacter westerhofensis sp. nov., Pedobacter metabolipauper sp. nov., Pedobacter hartonius sp. nov. and Pedobacter steynii sp. nov., isolated from a hard-water rivulet. Int. J. Syst. Evol. Microbiol., 2007, 57, 2221-2227.
Original article in IJSEM Online

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Pedobacter edaphicus Singh et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) THG-DA2.1=JCM 30351=KCTC 42232.
Sequence accession no. (16S rRNA) for the type strain: KM035953.
Whole-genome sequence accession no. for the type strain: -.
Etymology: L. masc. suff. -icus, adjectival suffix used with the sense of belonging to; N.L. masc. adj. edaphicus, living in soil.
Source: Environmental - soil.
Valid publication: Validation List no. 166. List of new names and new combinations previously effectively, but not validly, published. Int. J. Syst. Evol. Microbiol., 65 (2015), 3763-3767.
Validation List Online
Effective publication: Singh, H., Du, J., Ngo, H.T.T., Won, K.H., Kim, K.-Y. and Yi, T.-H. 2015. Pedobacter edaphicus sp. nov. isolated from forest soil in South Korea. Arch. Microbiol. 197, 781-787.
Effective publication Online

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Pedobacter ginsengisoli Ten et al. 2006, sp. nov.
Type strain: (see also StrainInfo.net) Gsoil 104 = KCTC 12576 = LMG 23399.
Sequence accession no. (16S rRNA gene) for the type strain: AB245371.
Etymology: N.L. n. ginsengum, ginseng; L. n. solum, soil; N.L. gen. n. ginsengisoli, of soil from a ginseng field, the source of the type strain.
Valid publication: TEN (L.N.), LIU (Q.M.), IM (W.T.), LEE (M.), YANG (D.C.) and LEE (S.T.): Pedobacter ginsengisoli sp. nov., a DNase-producing bacterium isolated from soil of a ginseng field in South Korea. Int. J. Syst. Evol. Microbiol., 2006, 56, 2565-2570.
Original article in IJSEM Online

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Pedobacter ginsengiterrae Hoang et al. 2013, sp. nov.
Type strain: (see also StrainInfo.net) DCY49 = JCM 17338 = KCTC 23317.
Sequence accession no. (16S rRNA gene) for the type strain: HM776704.
Etymology: N.L. n. ginsengum, ginseng; L. n. terra -ae, soil; N.L. gen. n. ginsengiterrae, from soil of a ginseng field.
Valid publication: HOANG (V.A.), KIM (Y.J.), NGUYEN (N.L.), MIN (J.W.) and YANG (D.C.): Pedobacter ginsengiterrae sp. nov., isolated from soil of a ginseng field. Int. J. Syst. Evol. Microbiol., 2013, 63,1273-1279.
Original article in IJSEM Online

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Pedobacter ginsenosidimutans Yang et al. 2013, sp. nov.
Type strain: (see also StrainInfo.net) THG-45=KACC 14530=JCM 16721.
Sequence accession no. (16S rRNA) for the type strain: GU138374.
Etymology: N.L. n. ginsenosidum, ginsenoside; L. part. adj. mutans, transforming, converting; N.L. part. adj. ginsenosidimutans, ginsenoside-converting.
Source: Environmental - soil.
Reference: YANG, J.-E., SON, H.-M., LEE, J. M., SHIN, H.-S., PARK, S.-Y., LEE, D.-G., KOOK, M. and YI, T.-H. 2013. Pedobacter ginsenosidimutans sp. nov., with ginsenoside-converting activity. Int. J. Syst. Evol. Microbiol., 63, 4396-4401.
Original article in IJSEM Online

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Pedobacter glacialis Qiu et al. 2014, sp. nov.
Type strain: (see also StrainInfo.net) 8-24=CCTCC AB 2012941=NRRL B-59993.
Sequence accession no. (16S rRNA) for the type strain: KC569795.
Etymology: L. fem. adj. glacialis, icy, full of ice.
Source: Environmental - soil.
Valid publication: QIU, X., QU, Z., JIANG, F., REN, L., CHANG, X., KAN, W., FANG, C. and PENG, F. 2014. Pedobacter huanghensis sp. nov. and Pedobacter glacialis sp. nov., isolated from Arctic glacier foreland. Int. J. Syst. Evol. Microbiol., 64, 2431-2436.
Original article in IJSEM Online

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Pedobacter glucosidilyticus Luo et al. 2010, sp. nov.
Type strain: (see also StrainInfo.net) 1-2 = CCTCC AB 206110 = KCTC 22438.
Sequence accession no. (16S rRNA gene) for the type strain: EU585748.
Etymology: N.L. n. glucosidum, glucoside; N.L. adj. lyticus -a -um (from Gr. adj. lutikos -ê -on), able to loosen, able to dissolve; N.L. masc. adj. glucosidilyticus, glucoside-dissolving.
Valid publication: LUO (X.), WANG (Z.), DAI (J.), ZHANG (L.), LI (J.), TANG (Y.), WANG (Y.) and FANG (C.): Pedobacter glucosidilyticus sp. nov., isolated from dry riverbed soil. Int. J. Syst. Evol. Microbiol., 2010, 60, 229-233.
Original article in IJSEM Online

Pedobacter glucosidilyticus Luo et al. 2010 emend. Zhou et al. 2012.
Type strain: (see also StrainInfo.net) 1-2 = CCTCC AB 206110 = KCTC 22438.
Sequence accession no. (16S rRNA gene) for the type strain: EU585748.
Etymology: N.L. n. glucosidum, glucoside; N.L. adj. lyticus -a -um (from Gr. adj. lutikos -ê -on), able to loosen, able to dissolve; N.L. masc. adj. glucosidilyticus, glucoside-dissolving.
Reference: ZHOU (Z.), JIANG (F.), WANG (S.), PENG (F.), DAI (J.), LI (W.) and FANG (C.): Pedobacter arcticus sp. nov., a facultative psychrophile isolated from Arctic soil, and emended descriptions of the genus Pedobacter, Pedobacter heparinus, Pedobacter daechungensis, Pedobacter terricola, Pedobacter glucosidilyticus and Pedobacter lentus. Int. J. Syst. Evol. Microbiol., 2012, 62, 1963-1969.
Original article in IJSEM Online

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Pedobacter hartonius Muurholm et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) WB 3.3-3 = CIP 109468 = DSM 19033.
Sequence accession no. (16S rRNA gene) for the type strain: AM491371.
Etymology: M.L. masc. n. Harto, the Harz, a mountain range in northern Germany; N.L. masc. adj. hartonius, pertaining to the Harz.
Valid publication: MUURHOLM (S.), COUSIN (S.), PÄUKER (O.), BRAMBILLA (E.) and STACKEBRANDT (E.): Pedobacter duraquae sp. nov., Pedobacter westerhofensis sp. nov., Pedobacter metabolipauper sp. nov., Pedobacter hartonius sp. nov. and Pedobacter steynii sp. nov., isolated from a hard-water rivulet. Int. J. Syst. Evol. Microbiol., 2007, 57, 2221-2227.
Original article in IJSEM Online

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Pedobacter heparinus (Payza and Korn 1956) Steyn et al. 1998, comb. nov. (Type species of the genus.)
Type strain: (see also StrainInfo.net) ATCC 13125= CCUG 12810 = CIP 104194 = CIP 105498 = DSM 2366 = IFO (now NBRC) 12017 = JCM 7457 = LMG 4024 = LMG 10339 = NCIB (now NCIMB) 9290 = NRRL B-14731.
Sequence accession no. (16S rRNA gene) for the type strain: CP001681 (complete genome).
Basonym: ¤ Flavobacterium heparinum Payza and Korn 1956 (Approved Lists 1980).
Other synonyms: ¤ Cytophaga heparina (Payza and Korn 1956) Christensen 1980, ¤ Sphingobacterium heparinum (Payza and Korn 1956) Takeuchi and Yokota 1993.
Etymology: Gr. n. hêpar, liver; N.L. masc. adj. heparinus, of or pertaining to degradation of heparin, acidic mucoheteropolysaccharide with sulfate groups from various animal tissues.
Valid publication: STEYN (P.L.), SEGERS (P.), VANCANNEYT (M.), SANDRA (P.), KERSTERS (K.) and JOUBERT (J.J.): Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae. Int. J. Syst. Bacteriol., 1998, 48, 165-177.
Original article in IJSEM Online

Pedobacter heparinus (Payza and Korn 1956) Steyn et al. 1998 emend. Zhou et al. 2012.
Type strain: (see also StrainInfo.net) ATCC 13125= CCUG 12810 = CIP 104194 = CIP 105498 = DSM 2366 = JCM 7457 = LMG 4024 = LMG 10339 = NBRC 12017 = NCIMB 9290 = NRRL B-14731.
Sequence accession no. (16S rRNA gene) for the type strain: CP001681 (complete genome).
Basonym: ¤ Flavobacterium heparinum Payza and Korn 1956 (Approved Lists 1980).
Other synonyms: ¤ Cytophaga heparina (Payza and Korn 1956) Christensen 1980, ¤ Sphingobacterium heparinum (Payza and Korn 1956) Takeuchi and Yokota 1993.
Etymology: Gr. n. hêpar, liver; N.L. masc. adj. heparinus, of or pertaining to degradation of heparin, acidic mucoheteropolysaccharide with sulfate groups from various animal tissues.
Reference: ZHOU (Z.), JIANG (F.), WANG (S.), PENG (F.), DAI (J.), LI (W.) and FANG (C.): Pedobacter arcticus sp. nov., a facultative psychrophile isolated from Arctic soil, and emended descriptions of the genus Pedobacter, Pedobacter heparinus, Pedobacter daechungensis, Pedobacter terricola, Pedobacter glucosidilyticus and Pedobacter lentus. Int. J. Syst. Evol. Microbiol., 2012, 62, 1963-1969.
Original article in IJSEM Online

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Pedobacter himalayensis Shivaji et al. 2005, sp. nov.
Type strain: (see also StrainInfo.net) HHS 22 = JCM 12171 = MTCC 6384.
Sequence accession no. (16S rRNA gene) for the type strain: AJ583425.
Etymology: N.L. masc. adj. himalayensis, pertaining to Himalaya.
Valid publication: SHIVAJI (S.), CHATURVEDI (P.), REDDY (G.S.N.) and SURESH (K.): Pedobacter himalayensis sp. nov., from the Hamta glacier located in the Himalayan mountain ranges of India. Int. J. Syst. Evol. Microbiol., 2005, 55, 1083-1088.
Original article in IJSEM Online

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Pedobacter huanghensis Qiu et al. 2014, sp. nov.
Type strain: (see also StrainInfo.net) M1-27=CCTCC AB 2012936=LMG 28205.
Sequence accession no. (16S rRNA) for the type strain: KC569794.
Etymology: N.L. masc. adj. huanghe, named after the Chinese Arctic Huanghe Station, the site where the type strain was isolated.
Source: Environmental - soil.
Valid publication: QIU, X., QU, Z., JIANG, F., REN, L., CHANG, X., KAN, W., FANG, C. and PENG, F. 2014. Pedobacter huanghensis sp. nov. and Pedobacter glacialis sp. nov., isolated from Arctic glacier foreland. Int. J. Syst. Evol. Microbiol., 64, 2431-2436.
Original article in IJSEM Online

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Pedobacter humi Trinh and Yi et al. 2016, sp. nov.
Type strain: (see also StrainInfo.net) THG S15-2= KCTC 42735=CCTCC AB 2015293.
Sequence accession no. (16S rRNA) for the type strain: KM073965.
Whole-genome sequence accession no. for the type strain: -.
Etymology: L. gen. n. humi, of earth, soil.
Source: Environmental - soil.
Valid publication: TRINH, H. and YI, T. H. 2016. Pedobacter humi sp. nov., isolated from a playground soil. Int. J. Syst. Evol. Microbiol., 66, 2382-2388.
Original article in IJSEM Online

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Pedobacter humicola Dahal and Kim et al. 2016, sp. nov.
Type strain: (see also StrainInfo.net) R135=KEMB 9005-332=KACC 18452=JCM 31010.
Sequence accession no. (16S rRNA) for the type strain: KT032156.
Whole-genome sequence accession no. for the type strain: -.
Etymology: L. n. humus, soil; L. suff. -cola, a dweller, inhabitant; N.L. n. humicola, a soil dweller.
Source: Environmental - soil.
Valid publication: DAHAL, R. H. and KIM, J. 2016. Pedobacter humicola sp. nov., a member of the genus Pedobacter isolated from soil. Int. J. Syst. Evol. Microbiol., 66, 2205-2211.
Original article in IJSEM Online

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Pedobacter insulae Yoon et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) DS-139 = DSM 18684 = KCTC 12820.
Sequence accession no. (16S rRNA gene) for the type strain: EF100697.
Etymology: L. fem. gen. n. insulae, of an island, referring to the source of isolation of the type strain.
Valid publication: YOON (J.H.), KANG (S.J.), OH (H.W.) and OH (T.K.): Pedobacter insulae sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol., 2007, 57, 1999-2003.
Original article in IJSEM Online

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Pedobacter jejuensis Kook et al. 2014, sp. nov.
Type strain: (see also StrainInfo.net) THG-DR3=KACC 17172=JCM 18824.
Sequence accession no. (16S rRNA) for the type strain: KC252614.
Whole-genome sequence accession no. for the type strain: N/A.
Etymology: N.L. masc. adj. jejuensis, pertaining to Jeju, Republic of Korea, where the type strain was isolated.
Source: Environmental - soil.
Valid publication: KOOK, M., PARK, Y. and YI, T.-H. 2014. Pedobacter jejuensis sp. nov., isolated from soil of a pine grove, and emended description of the genus Pedobacter. Int. J. Syst. Evol. Microbiol., 64, 1789-1794.
Original article in IJSEM Online

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Pedobacter koreensis Baik et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) WPCB189 = KCTC 12536 = NBRC 101153.
Sequence accession no. (16S rRNA gene) for the type strain: DQ092871.
Etymology: N.L. masc. adj. koreensis, pertaining to Korea, from where the organism was isolated.
Valid publication: BAIK (K.S.), PARK (Y.D.), KIM (M.S.), PARK (S.C.), MOON (E.Y.), RHEE (M.S.), CHOI (J.H.) and SEONG (C.N.): Pedobacter koreensis sp. nov., isolated from fresh water. Int. J. Syst. Evol. Microbiol., 2007, 57, 2079-2083.
Original article in IJSEM Online

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Pedobacter kyungheensis Yang et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) THG-T17=KACC 16221=LMG 26577.
Sequence accession no. (16S rRNA) for the type strain: JN196132.
Whole-genome sequence accession no. for the type strain: -.
Etymology: N.L. masc. gen. n. Kyungheensis, of Kyung Hee University, Republic of Korea.
Source: Environmental - soil.
Valid publication: Validation List no. 161. List of new names and new combinations previously effectively, but not validly, published. Int. J Syst. Evol. Microbiol., 65 (2015), 1-4.
Validation List Online
Effective publication: YANG, J.-E., SHIN, J.-Y., PARK, S.-Y., T. MAVLONOV, G., YI, E.-J., LEE, E.-H., LEE, J. M. and YI, T.-H. 2012. Pedobacter kyungheensis sp. nov., with ginsenoside converting activity. The Journal of general and applied microbiology, 58, 309-316. 4
Effective publication Online

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Pedobacter lentus Yoon et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) DS-40 = JCM 14593 = KCTC 12875.
Sequence accession no. (16S rRNA gene) for the type strain: EF446146.
Etymology: L. masc. adj. lentus, slow, delayed, referring to the slow growth of the micro-organism.
Valid publication: YOON (J.H.), KANG (S.J.), PARK (S.) and OH (T.K.): Pedobacter lentus sp. nov. and Pedobacter terricola sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol., 2007, 57, 2089-2095.
Original article in IJSEM Online

Pedobacter lentus Yoon et al. 2007 emend. Zhou et al. 2012.
Type strain: (see also StrainInfo.net) DS-40 = JCM 14593 = KCTC 12875.
Sequence accession no. (16S rRNA gene) for the type strain: EF446146.
Etymology: L. masc. adj. lentus, slow, delayed, referring to the slow growth of the micro-organism.
Reference: ZHOU (Z.), JIANG (F.), WANG (S.), PENG (F.), DAI (J.), LI (W.) and FANG (C.): Pedobacter arcticus sp. nov., a facultative psychrophile isolated from Arctic soil, and emended descriptions of the genus Pedobacter, Pedobacter heparinus, Pedobacter daechungensis, Pedobacter terricola, Pedobacter glucosidilyticus and Pedobacter lentus. Int. J. Syst. Evol. Microbiol., 2012, 62, 1963-1969.
Original article in IJSEM Online

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Pedobacter lignilitoris Park et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) W-WS13=KCTC 42500=CECT 8725.
Sequence accession no. (16S rRNA) for the type strain: KP641351.
Etymology: L. n. lignum, - i, wood; L. n. litus -oris, the seashore, coast; N.L. gen. n. lignilitoris, of wood of the seashore, from which the type strain was isolated.
Source: Plant.
Valid publication: PARK, S., PARK, J. M., JUNG, Y. T., WON, S. M. and YOON, J. H. 2015. Pedobacter lignilitoris sp. nov., isolated from wood falls Int. J. Syst. Evol. Microbiol., 65, 3481-3486.
Original article in IJSEM Online

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Pedobacter lotistagni Singh et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) THG-DN6.8=JCM 30354=KCTC 42229.
Sequence accession no. (16S rRNA) for the type strain: KM035962.
Whole-genome sequence accession no. for the type strain: -.
Etymology: L. fem. n. lotos lotus; L. neut. n. stagnum pond; N.L. gen. n. lotistagni of a lotus pond.
Source: Environmental - freshwater.
Valid publication: Validation List no. 164. List of new names and new combinations previously effectively, but not validly, published. Int. J. Syst. Evol. Microbiol., 65 (2015), 2017-2025.
Validation List Online
Effective publication: Singh, H., Du, J., Ngo, H.T.T., Kim, K.-Y. and Yi, T.-H. 2015. Pedobacter lotistagni sp. nov. isolated from lotus pond water. Antonie van Leeuwenhoek, 107, 951-959.
Effective publication Online

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Pedobacter luteus Oh et al. 2013, sp. nov.
Type strain: (see also StrainInfo.net) N7d-4 = DSM 22385 = KCTC 22699.
Sequence accession no. (16S rRNA gene) for the type strain: FJ377314.
Etymology: L. masc. adj. luteus, orange–yellow, referring to the colony colour on R2A agar.
Valid publication: OH (H.W.), KIM (B.C.), PARK (D.S.), JEONG (W.J.), KIM (H.), LEE (K.H.) and KIM (S.U.): Pedobacter luteus sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol., 2013, 63,1304-1310.
Original article in IJSEM Online

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Pedobacter lycopersici Cho et al. 2016, sp. nov.
Type strain: (see also StrainInfo.net) T16R-88=KACC 18652=NBRC 111984.
Sequence accession no. (16S rRNA) for the type strain: KU379664.
Whole-genome sequence accession no. for the type strain: .
Etymology: N.L. gen. n. lycopersici, of Lycopersicon, the systematic name of the tomato genus.
Source: Plant.
Valid publication: CHO, H., AHN, J. H., WEON, H. Y., JOA, J. H., KWON, S. W. and KIM, S. J. 2016. Pedobacter lycopersici sp. nov., isolated from the rhizosphere of tomato plant (Solanum lycopersicum L.). Int. J. Syst. Evol. Microbiol., 66, 5406-5411.
Original article in IJSEM Online

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Pedobacter metabolipauper Muurholm et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) WB 2.3-71 = CIP 109480 = DSM 19035.
Sequence accession no. (16S rRNA gene) for the type strain: AM491370.
Etymology: N.L. n. metabolismus, metabolism (word stem metabol-); L. masc. adj. pauper, poor; N.L. masc. adj. metabolipauper, metabolically poor.
Valid publication: MUURHOLM (S.), COUSIN (S.), PÄUKER (O.), BRAMBILLA (E.) and STACKEBRANDT (E.): Pedobacter duraquae sp. nov., Pedobacter westerhofensis sp. nov., Pedobacter metabolipauper sp. nov., Pedobacter hartonius sp. nov. and Pedobacter steynii sp. nov., isolated from a hard-water rivulet. Int. J. Syst. Evol. Microbiol., 2007, 57, 2221-2227.
Original article in IJSEM Online

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Pedobacter nanyangensis Zhang et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) Q-4=KCTC 42442=ACCC 19798.
Sequence accession no. (16S rRNA) for the type strain: KM210514.
Etymology: N.L. masc. adj. nanyangensis, referring to Nanyang in Henan province, China, the area from where the type strain was isolated.
Source: Environmental - soil.
Valid publication: ZHANG, H., ZHANG, J., SONG, M., CHENG, M. G., WU, Y. D., GUO, S. H., LI, Q., HONG, Q. and HUANG, X. 2015. Pedobacter nanyangensis sp. nov., isolated from herbicide-contaminated soil Int. J. Syst. Evol. Microbiol., 65, 3517-3521.
Original article in IJSEM Online

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Pedobacter nutrimenti Derichs et al. 2014, sp. nov.
Type strain: (see also StrainInfo.net) J22=DSM 27372=CCUG 64422.
Sequence accession no. (16S rRNA) for the type strain: HF536497.
Whole-genome sequence accession no. for the type strain: N/A.
Etymology: L. gen. n. nutrimenti, of nourishment, nutriment according to the isolation source.
Source: Food.
Valid publication: DERICHS, J., KÄMPFER, P. and LIPSKI, A. 2014. Pedobacter nutrimenti sp. nov., isolated from chilled food. Int. J. Syst. Evol. Microbiol., 64, 1310-1316.
Original article in IJSEM Online

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Pedobacter nyackensis Gordon et al. 2009, sp. nov.
Type strain: (see also StrainInfo.net) NWG-II14 = DSM 19625 = LMG 24260.
Sequence accession no. (16S rRNA gene) for the type strain: EU030686.
Etymology: N.L. masc. adj. nyackensis, pertaining to Nyack, a region of north-western Montana, USA.
Valid publication: GORDON (N.S.), VALENZUELA (A.), ADAMS (S.M.), RAMSEY (P.W.), POLLOCK (J.L.), HOLBEN (W.E.) and GANNON (J.E.): Pedobacter nyackensis sp. nov., Pedobacter alluvionis sp. nov. and Pedobacter borealis sp. nov., isolated from Montana flood-plain sediment and forest soil. Int. J. Syst. Evol. Microbiol., 2009, 59, 1720-1726.
Original article in IJSEM Online

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Pedobacter oryzae Jeon et al. 2009, sp. nov.
Type strain: (see also StrainInfo.net) N7 = DSM 19973 = KACC 12821.
Sequence accession no. (16S rRNA gene) for the type strain: EU109726.
Etymology: L. fem. gen. n. oryzae, of rice, referring to the rice paddy fields where the type strain was isolated.
Valid publication: JEON (Y.), KIM (J.M.), PARK (J.H.), LEE (S.H.), SEONG (C.M.), LEE (S.S.) and JEON (C.O.): Pedobacter oryzae sp. nov., isolated from rice paddy soil. Int. J. Syst. Evol. Microbiol., 2009, 59, 2491-2495.
Original article in IJSEM Online

Note: The epithet oryzae is a "L. fem. gen. n.", not a "L. fem. n." as cited in the paper by Jeon et al. 2009.

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Pedobacter panaciterrae Yoon et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) Gsoil 042 = KCTC 12594 = LMG 23400.
Sequence accession no. (16S rRNA gene) for the type strain: AB245368.
Etymology: N.L. n. Panax -acis, scientific name of ginseng; L. n. terra, soil; N.L. gen. n. panaciterrae, of soil from a ginseng field, the source of the type strain.
Valid publication: YOON (M.H.), TEN (L.N.), IM (W.T.) and LEE (S.T.): Pedobacter panaciterrae sp. nov., isolated from soil in South Korea. Int. J. Syst. Evol. Microbiol., 2007, 57, 381-386.
Original article in IJSEM Online

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Pedobacter piscium (Takeuchi and Yokota 1993) Steyn et al. 1998, comb. nov.
Type strain: (see also StrainInfo.net) CIP 104195 = IFO (now NBRC) 14985 = JCM 7454 = LMG 14024.
Sequence accession no. (16S rRNA gene) for the type strain: AJ438174.
Basonym: ¤ Sphingobacterium piscium Takeuchi and Yokota 1993.
Earlier heterotypic synonym: ¤ Pedobacter antarcticus (corrig. Shivaji et al. 1992) Farfán et al. 2014, comb. nov.
Etymology: L. n. piscis, fish; L. gen. pl. n. piscium, of/from fishes.
Valid publication: STEYN (P.L.), SEGERS (P.), VANCANNEYT (M.), SANDRA (P.), KERSTERS (K.) and JOUBERT (J.J.): Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae. Int. J. Syst. Bacteriol., 1998, 48, 165-177.
Original article in IJSEM Online

Note: On page 175, the type strain is incorrectly cited as LMG 14023 = ATCC 13125(sic) = IFO (now NBRC) 12017 (sic).

Pedobacter piscium (Takeuchi and Yokota 1993) Steyn et al. 1998 emend. Farfán et al. 2014.
Reference: FARFÁN, M., MONTES, M. J. and MARQUÉS, A. M. 2014. Reclassification of Sphingobacterium antarcticum Shivaji et al. 1992 as Pedobacter antarcticus comb. nov. and Pedobacter piscium (Takeuchi and Yokota 1993) Steyn et al. 1998 as a later heterotypic synonym of Pedobacter antarcticus. Int. J. Syst. Evol. Microbiol., 64, 863-868.
Original article.

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Pedobacter pituitosus Chun et al. 2014, sp. nov.
Type strain: (see also StrainInfo.net) MIC2002=KACC 17064=JCM 18729.
Sequence accession no. (16S rRNA) for the type strain: JX978785.
Etymology: L. masc. adj. pituitosus, slimy.
Source: Environmental - freshwater.
Valid publication: CHUN, J., KANG, J. Y. and JAHNG, K. Y. 2014. Pedobacter pituitosus sp. nov., isolated from a waterfall. Int. J. Syst. Evol. Microbiol., 64, 3838-3843.
Original article in IJSEM Online

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Pedobacter psychrotolerans Manandhar et al. 2016, sp. nov.
Type strain: (see also StrainInfo.net) V5RD=CGMCC 1.15644=DSM 103236.
Sequence accession no. (16S rRNA) for the type strain: KU535673.
Whole-genome sequence accession no. for the type strain: .
Etymology: Gr. adj. psychros, cold; L. pres. part. tolerans, tolerating; N.L. part. adj. psychrotolerans, tolerating cold temperature.
Source: Environmental - soil.
Valid publication: MANANDHAR, P., ZHANG, G., LAMA, A., HU, Y. and GAO, F. 2016. Pedobacter psychrotolerans sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol., 66, 4560-4566.
Original article in IJSEM Online

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Pedobacter rhizosphaerae Kwon et al. 2011, sp. nov.
Type strain: (see also StrainInfo.net) 01-96 = KACC 14938 = NBRC 107690.
Sequence accession no. (16S rRNA gene) for the type strain: AM279214.
Etymology: Gr. fem. n. rhiza, root; L. fem. n. sphaera -ae, ball, any globe, sphere; N.L. gen. fem. n. rhizosphaerae, of the rhizosphere.
Valid publication: KWON (S.W.), SON (J.A.), KIM (S.J.), KIM (Y.S.), PARK (I.C.), BOK (J.I.) and WEON (H.Y.): Pedobacter rhizosphaerae sp. nov. and Pedobacter soli sp. nov., isolated from rhizosphere soil of Chinese cabbage (Brassica campestris). Int. J. Syst. Evol. Microbiol., 2011, 61, 2874-2879.
Original article in IJSEM Online

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Pedobacter rivuli Kang et al. 2014, sp. nov.
Type strain: (see also StrainInfo.net) HME8457=KACC 17312=CECT 8291.
Sequence accession no. (16S rRNA) for the type strain: JQ911707.
Etymology: L. gen. n. rivuli, of/from a small stream.
Source: Environmental - freshwater.
Valid publication: KANG, H., KIM, H., JOUNG, Y. and JOH, K. 2014. Pedobacter rivuli sp. nov., isolated from a freshwater stream. Int. J. Syst. Evol. Microbiol., 64, 4073-4078.
Original article in IJSEM Online

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Pedobacter roseus Hwang et al. 2006, sp. nov.
Type strain: (see also StrainInfo.net) CL-GP80 = JCM 13399 = KCCM 42272.
Sequence accession no. (16S rRNA gene) for the type strain: DQ112353.
Etymology: L. masc. adj. roseus, rose-coloured, pink, referring to the color of the colonies on agar plates.
Valid publication: HWANG (C.Y.), CHOI (D.H.) and CHO (B.C.): Pedobacter roseus sp. nov., isolated from a hypertrophic pond, and emended description of the genus Pedobacter. Int. J. Syst. Evol. Microbiol., 2006, 56, 1831-1836.
Original article in IJSEM Online

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Pedobacter ruber Margesin and Zhang 2013, sp. nov.
Type strain: (see also StrainInfo.net) W1 = DSM 24536 = LMG 26240.
Sequence accession no. (16S rRNA gene) for the type strain: HQ882803.
Etymology: L. masc. adj. ruber, red coloured, referring to the pigmentation of the bacterium.
Valid publication: MARGESIN (R.) and ZHANG (D.C.): Pedobacter ruber sp. nov., a psychrophilic bacterium isolated from soil. Int. J. Syst. Evol. Microbiol., 2013, 63, 339-344.
Original article in IJSEM Online

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Pedobacter saltans Steyn et al. 1998, sp. nov.
Type strain: (see also StrainInfo.net) CCUG 39354 = CIP 105500 = DSM 12145 = JCM 21818 = LMG 10337 = NBRC 100064.
Sequence accession no. (16S rRNA gene) for the type strain: CP002545 (complete genome).
Etymology: L. v. saltare, to dance; L. part. adj. saltans, dancing, referring to the gliding motility of the strain.
Valid publication: SSTEYN (P.L.), SEGERS (P.), VANCANNEYT (M.), SANDRA (P.), KERSTERS (K.) and JOUBERT (J.J.): Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae. Int. J. Syst. Bacteriol., 1998, 48, 165-177.
Original article in IJSEM Online

¤ Pseudopedobacter saltans (Steyn 1998) Cao et al. 2014, comb. nov.

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Pedobacter sandarakinus Yoon et al. 2006, sp. nov.
Type strain: (see also StrainInfo.net) DS-27 = CIP 108922 = KCTC 12559.
Sequence accession no. (16S rRNA gene) for the type strain: DQ235228.
Etymology: N.L. masc. adj. sandarakinus (from Gr. adj. sandarakinos), orange-coloured.
Valid publication: YOON (J.H.), LEE (M.H.), KANG (S.J.), PARK (S.Y.) and OH (T.K.): Pedobacter sandarakinus sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol., 2006, 56, 1273-1277.
Original article in IJSEM Online

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Pedobacter seoulensis Ngo et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) THG-G12=JCM 19363=KACC 17529.
Sequence accession no. (16S rRNA) for the type strain: KF150693.
Whole-genome sequence accession no. for the type strain: -.
Etymology: N.L. masc. adj. seoulensis, pertaining to Seoul, South Korea, the geographical origin of the species.
Source: Environmental - soil.
Valid publication: Validation List no. 166. List of new names and new combinations previously effectively, but not validly, published. Int. J. Syst. Evol. Microbiol., 65 (2015), 3763-3767.
Validation List Online
Effective publication: Ngo, H.T.T., Son, H.-M., Park, S.-Y., Kim, K.-Y. and Yi, T.-H. 2014. Pedobacter seoulensis sp. nov., isolated from soil of a bamboo field. Antonie van Leeuwenhoek 105, 961-970.
Effective publication Online

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Pedobacter silvilitoris Park et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) W-WS1=KCTC 42174=CECT 8669.
Sequence accession no. (16S rRNA) for the type strain: KM229740.
Whole-genome sequence accession no. for the type strain: -.
Etymology: L. n. silva, wood; L. n. litus -oris, the seashore, coast; N.L. gen. n. silvilitoris, of wood of seashore, from which the type strain was isolated.
Source: Plant.
Valid publication: PARK, S., JUNG, Y. T., PARK, J. M., WON, S. M. and YOON, J. H. 2015. Pedobacter silvilitoris sp. nov., isolated from wood falls. Int. J. Syst. Evol. Microbiol., 65, 1284-1289.
Original article in IJSEM Online

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Pedobacter soli Kwon et al. 2011, sp. nov.
Type strain: (see also StrainInfo.net) 15-51 = KACC 14939 = NBRC 107691.
Sequence accession no. (16S rRNA gene) for the type strain: AM279215.
Etymology: L. gen. n. soli, of soil, the source of the type strain.
Valid publication: KWON (S.W.), SON (J.A.), KIM (S.J.), KIM (Y.S.), PARK (I.C.), BOK (J.I.) and WEON (H.Y.): Pedobacter rhizosphaerae sp. nov. and Pedobacter soli sp. nov., isolated from rhizosphere soil of Chinese cabbage (Brassica campestris). Int. J. Syst. Evol. Microbiol., 2011, 61, 2874-2879.
Original article in IJSEM Online

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Pedobacter steynii Muurholm et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) WB 2.3-45 = CIP 109507 = DSM 19110.
Sequence accession no. (16S rRNA gene) for the type strain: AM491372.
Etymology: N.L. gen. masc. n. steynii, of Steyn, named after P. L. Steyn, the microbiologist who described the genus Pedobacter.
Valid publication: MUURHOLM (S.), COUSIN (S.), PÄUKER (O.), BRAMBILLA (E.) and STACKEBRANDT (E.): Pedobacter duraquae sp. nov., Pedobacter westerhofensis sp. nov., Pedobacter metabolipauper sp. nov., Pedobacter hartonius sp. nov. and Pedobacter steynii sp. nov., isolated from a hard-water rivulet. Int. J. Syst. Evol. Microbiol., 2007, 57, 2221-2227.
Original article in IJSEM Online

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Pedobacter suwonensis Kwon et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) 15-52 = DSM 18130 = KACC 11317.
Sequence accession no. (16S rRNA gene) for the type strain: DQ097274.
Etymology: N.L. masc. adj. suwonensis, of or belonging to Suwon, the city in which the type strain was isolated.
Valid publication: KWON (S.W.), KIM (B.Y.), LEE (K.H.), JANG (K.Y.), SEOK (S.J.), KWON (J.S.), KIM (W.G.) and WEON (H.Y.): Pedobacter suwonensis sp. nov., isolated from the rhizosphere of Chinese cabbage (Brassica campestris). Int. J. Syst. Evol. Microbiol., 2007, 57, 480-484.
Original article in IJSEM Online

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Pedobacter terrae Yoon et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) DS-57 = DSM 17933 = KCTC 12762.
Sequence accession no. (16S rRNA gene) for the type strain: DQ889723.
Etymology: L. gen. n. terrae, of the earth.
Valid publication: YOON (J.H.), KANG (S.J.) and OH (T.K.): Pedobacter terrae sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol., 2007, 57, 2462-2466.
Original article in IJSEM Online

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Pedobacter terricola Yoon et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) DS-45 = JCM 14594 = KCTC 12876.
Sequence accession no. (16S rRNA gene) for the type strain: EF446147.
Etymology: L. masc. n. terricola, a dweller of soil, referring to the isolation of the type strain from soil.
Valid publication: YOON (J.H.), KANG (S.J.), PARK (S.) and OH (T.K.): Pedobacter lentus sp. nov. and Pedobacter terricola sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol., 2007, 57, 2089-2095.
Original article in IJSEM Online

Pedobacter terricola Yoon et al. 2007 emend. Zhou et al. 2012.
Type strain: (see also StrainInfo.net) DS-45 = JCM 14594 = KCTC 12876.
Sequence accession no. (16S rRNA gene) for the type strain: EF446147.
Etymology: L. masc. n. terricola, a dweller of soil, referring to the isolation of the type strain from soil.
Reference: ZHOU (Z.), JIANG (F.), WANG (S.), PENG (F.), DAI (J.), LI (W.) and FANG (C.): Pedobacter arcticus sp. nov., a facultative psychrophile isolated from Arctic soil, and emended descriptions of the genus Pedobacter, Pedobacter heparinus, Pedobacter daechungensis, Pedobacter terricola, Pedobacter glucosidilyticus and Pedobacter lentus. Int. J. Syst. Evol. Microbiol., 2012, 62, 1963-1969.
Original article in IJSEM Online

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Pedobacter tournemirensis Urios et al. 2013, sp. nov.
Type strain: (see also StrainInfo.net) TF5-37.2-LB10 = CIP 110085 = DSM 23085 = MOLA 820.
Sequence accession no. (16S rRNA gene) for the type strain: GU198945.
Etymology: N. L. masc. adj. tournemirensis, of or belonging to Tournemire, a village in Aveyron, France.
Valid publication: URIOS (L.), INTERTAGLIA (L.) and MAGOT (M.): Pedobacter tournemirensis sp. nov., isolated from a fault water sample of a deep Toarcian argillite layer. Int. J. Syst. Evol. Microbiol., 2013, 63, 303-308.
Original article in IJSEM Online

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Pedobacter trunci Du et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) THG-DN3.19=KCTC 42233=JCM 30353.
Sequence accession no. (16S rRNA) for the type strain: KM035944.
Whole-genome sequence accession no. for the type strain: -.
Etymology: L. gen. n. trunci, of a tree trunk.
Source: Plant.
Valid publication: DU, J., SINGH, H., NGO, H. T., WON, K. H., KIM, K. Y. and YI, T. H. 2015. Pedobacter daejeonensis sp. nov. and Pedobacter trunci sp. nov., isolated from an ancient tree trunk, and emended description of the genus Pedobacter. Int. J. Syst. Evol. Microbiol., 65, 1241-1246.
Original article in IJSEM Online

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Pedobacter ureilyticus Ngo et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) THG-T11=KACC 17660=JCM 19461.
Sequence accession no. (16S rRNA) for the type strain: KF532135.
Etymology: N.L. n. urea -ae, urea; N.L. masc. adj. lyticus (from Gr. masc. adj. lytikos), able to loosen, able to dissolve; N.L. masc. adj. ureilyticus, urea-dissolving.
Source: Environmental - soil.
Valid publication: NGO, H. T. T., KOOK, M. and YI, T.-H. 2015. Pedobacter ureilyticus sp. nov., isolated from tomato rhizosphere soil. Int. J. Syst. Evol. Microbiol., 65, 1008-1014.
Original article in IJSEM Online

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Pedobacter vanadiisoli Wang et al. 2016, sp. nov.
Type strain: (see also StrainInfo.net) XNV015=CCTCC AB 2015319=KCTC 42866.
Sequence accession no. (16S rRNA) for the type strain: KU179044.
Whole-genome sequence accession no. for the type strain: .
Etymology: N.L. n. vanadium, vanadium; L. gen. n. soli, of soil; N.L. gen. n. vanadiisoli, of vanadium soil.
Source: Environmental - soil.
Valid publication: WANG, Z., TAN, Y., XU, D., WANG, G., YUAN, J. and ZHENG, S. 2016. Pedobacter vanadiisoli sp. nov., isolated from soil of a vanadium mine. Int. J. Syst. Evol. Microbiol., 66, 5112-5117.
Original article in IJSEM Online

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Pedobacter westerhofensis Muurholm et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) WB 3.3-22 = CIP 109479 = DSM 19036.
Sequence accession no. (16S rRNA gene) for the type strain: AM491369.
Etymology: N.L. masc. adj. westerhofensis, pertaining to Westerhof, a village in the Harz Mountains.
Valid publication: MUURHOLM (S.), COUSIN (S.), PÄUKER (O.), BRAMBILLA (E.) and STACKEBRANDT (E.): Pedobacter duraquae sp. nov., Pedobacter westerhofensis sp. nov., Pedobacter metabolipauper sp. nov., Pedobacter hartonius sp. nov. and Pedobacter steynii sp. nov., isolated from a hard-water rivulet. Int. J. Syst. Evol. Microbiol., 2007, 57, 2221-2227.
Original article in IJSEM Online

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Pedobacter xixiisoli Zeng et al. 2014, sp. nov.
Type strain: (see also StrainInfo.net) S27=CGMCC 1.12803=NBRC 110388.
Sequence accession no. (16S rRNA) for the type strain: KJ150595.
Etymology: L. gen. n. soli, of soil. N.L. gen. n. xixiisoli, from Xixi soil.
Source: Environmental - soil.
Valid publication: ZENG, Y., FENG, H. and HUANG, Y. 2014. Pedobacter xixiisoli sp. nov., isolated from bank soil. Int. J. Syst. Evol. Microbiol., 64, 3683-3689.
Original article in IJSEM Online

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Pedobacter zeae Gao et al. 2017, sp. nov.
Type strain: (see also StrainInfo.net) 22=CGMCC 1.15287=DSM 100774.
Sequence accession no. (16S rRNA) for the type strain: KR610524.
Etymology: N.L. gen. n. zeae, of Zea (maize), the plant from which the first isolate was obtained.
Source: Plant.
Valid publication: GAO, J. L., SUN, P., MAO, X. J., DU, Y. L., LIU, B. Y. and SUN, J. G. 2017. Pedobacter zeae sp. nov., an endophytic bacterium isolated from maize root. Int. J. Syst. Evol. Microbiol., 67, 231-236.
Original article in IJSEM Online

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