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Genus Shimia

Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow () only indicates the sequence of valid publication of names and does not mean that the last name in the sequence must be used (see: Introduction).

Number of species cited in this file: 5
Number of subspecies cited in this file: 0

Classification (Warning: see also the file "Classification of prokaryotes: Introduction").

 

Shimia Choi and Cho 2006, gen. nov.
Type species: ¤ Shimia marina Choi and Cho 2006.
Etymology: N.L. fem. n. Shimia, of Shim, named in honour of Dr Jae H. Shim, for his contributions to marine plankton ecology in Korea.
Valid publication: CHOI (D.H.) and CHO (B.C.): Shimia marina gen. nov., sp. nov., a novel bacterium of the Roseobacter clade isolated from biofilm in a coastal fish farm. Int. J. Syst. Evol. Microbiol., 2006, 56, 1869-1873.
Original article in IJSEM Online

Shimia Choi and Cho 2006 emend. Hameed et al. 2013.
Reference: HAMEED, A., SHAHINA, M., LIN, S.-Y., LAI, W.-A., HSU, Y.-H., LIU, Y.-C., HUANG, Y.-M. and YOUNG, C.-C. 2013. Shimia biformata sp. nov., isolated from surface seawater, and emended description of the genus Shimia Choi and Cho 2006. Int. J. Syst. Evol. Microbiol., 63, 4533-4539.
Original article in IJSEM Online

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Shimia biformata Hameed et al. 2013, sp. nov.
Type strain: (see also StrainInfo.net) CC-AMW-C=JCM 18818=BCRC 80548.
Sequence accession no. (16S rRNA) for the type strain: KC169813.
Etymology: L. fem. adj. biformata, double-formed, two-shaped, pertaining to the different cell morphology during different growth phases.
Source: Environmental - marine.
Reference: HAMEED, A., SHAHINA, M., LIN, S.-Y., LAI, W.-A., HSU, Y.-H., LIU, Y.-C., HUANG, Y.-M. and YOUNG, C.-C. 2013. Shimia biformata sp. nov., isolated from surface seawater, and emended description of the genus Shimia Choi and Cho 2006. Int. J. Syst. Evol. Microbiol., 63, 4533-4539.
Original article in IJSEM Online

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Shimia haliotis Hyun et al. 2013, sp. nov.
Type strain: (see also StrainInfo.net) WM35=KACC 17212=JCM 18870.
Sequence accession no. (16S rRNA) for the type strain: KC196071.
Etymology: N.L. gen. n. haliotis, of Haliotis, the systematic name of a genus of abalone, isolated from Haliotis discus hannai.
Source: Animal.
Valid publication: HYUN, D.-W., KIM, M.-S., SHIN, N.-R., KIM, J. Y., KIM, P. S., WHON, T. W., YUN, J.-H. and BAE, J.-W. 2013. Shimia haliotis sp. nov., a bacterium isolated from the gut of an abalone, Haliotis discus hannai. Int. J. Syst. Evol. Microbiol., 63, 4248-4253.
Original article in IJSEM Online

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Shimia isoporae Chen et al. 2011, sp. nov.
Type strain: (see also StrainInfo.net) SW6 = SW-6 = BCRC 80085 = LMG 25377.
Sequence accession no. (16S rRNA gene) for the type strain: FJ976449.
Etymology: N.L. gen. n. isoporae, of Isopora, isolated from a coral belonging to the genus Isopora.
Valid publication: CHEN (M.H.), SHEU (S.Y.), CHEN (C.A.), WANG (J.T.) and CHEN (W.M.): Shimia isoporae sp. nov., isolated from the reef-building coral Isopora palifera. Int. J. Syst. Evol. Microbiol., 2011, 61, 823-827.
Original article in IJSEM Online

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Shimia marina Choi and Cho 2006, sp. nov. (Type species of the genus.)
Type strain: (see also StrainInfo.net) CL-TA03 = JCM 13038 = KCCM 42117.
Sequence accession no. (16S rRNA gene) for the type strain: AY962292.
Etymology: L. fem. adj. marina, of or belonging to the sea, marine.
Valid publication: CHOI (D.H.) and CHO (B.C.): Shimia marina gen. nov., sp. nov., a novel bacterium of the Roseobacter clade isolated from biofilm in a coastal fish farm. Int. J. Syst. Evol. Microbiol., 2006, 56, 1869-1873.
Original article in IJSEM Online

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Shimia sagamensis Nogi et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) JAMH 011=JCM 30583=DSM 29734.
Sequence accession no. (16S rRNA) for the type strain: LC008540.
Etymology: N.L. fem. adj. sagamensis, pertaining to Sagami Bay, where the type strain was isolated.
Source: Environmental - marine.
Valid publication: NOGI, Y., MORI, K., UCHIDA, H. and HATADA, Y. 2015. Shimia sagamensis sp. nov., a marine bacterium isolated from cold-seep sediment. Int. J. Syst. Evol. Microbiol., 65, 2786-2790.
Original article in IJSEM Online

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