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Genus Polaribacter

Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow () only indicates the sequence of valid publication of names and does not mean that the last name in the sequence must be used (see: Introduction).

Number of species cited in this file: 14
Number of subspecies cited in this file: 0

Classification (Warning: see also the file "Classification of prokaryotes: Introduction").


For a detailed description of this taxon see Bergey’s Manual of Systematics of Archaea and Bacteria (BMSAB).


 

Polaribacter Gosink et al. 1998, gen. nov.
Type species: ¤ Polaribacter filamentus Gosink et al. 1998.
Etymology: N.L. adj. polaris (from L. n. polus, a pole), pertaining to the geographic poles; N.L. masc. n. bacter, rod or staff; N.L. masc. n. Polaribacter, rod-shaped bacteria from polar habitats.
Valid publication: GOSINK (J.J.), WOESE (C.R.) and STALEY (J.T.): Polaribacter gen. nov., with three new species, P. irgensii sp. nov., P. franzmannii sp. nov. and P. filamentus sp. nov., gas vacuolate polar marine bacteria of the Cytophaga-Flavobacterium-Bacteroides group and reclassification of 'Flectobacillus glomeratus' as Polaribacter glomeratus comb. nov. Int. J. Syst. Bacteriol., 1998, 48, 223-235.
Original article in IJSEM Online

Polaribacter Gosink et al. 1998 emend. Fukui et al. 2013.
Reference: FUKUI (Y.), ABE (M.), KOBAYASHI (M.), SAITO (H.), OIKAWA (H.), YANO (Y.) and SATOMI (M.): Polaribacter porphyrae sp. nov., isolated from the red alga Porphyra yezoensis, and emended descriptions of the genus Polaribacter and two Polaribacter species. Int. J. Syst. Evol. Microbiol., 2013, 63, 1665-1672.
Original article in IJSEM Online

Polaribacter Gosink et al. 1998 emend. Fukui et al. 2013 emend. Kim et al. 2013.
Reference: KIM, B.-C., OH, H. W., KIM, H., PARK, D.-S., HONG, S. G., LEE, H. K. and BAE, K. S. 2013. Polaribacter sejongensis sp. nov., isolated from Antarctic soil, and emended descriptions of the genus Polaribacter, Polaribacter butkevichii and Polaribacter irgensii. Int. J. Syst. Evol. Microbiol., 63, 4000-4005.
Original article in IJSEM Online

Polaribacter Gosink et al. 1998 emend. Fukui et al. 2013 emend. Kim et al. 2013 emend. Li et al. 2014.
Reference: LI, H., ZHANG, X.-Y., LIU, C., LIN, C.-Y., XU, Z., CHEN, X.-L., ZHOU, B.-C., SHI, M. and ZHANG, Y.-Z. 2014. Polaribacter huanghezhanensis sp. nov., isolated from Arctic fjord sediment, and emended description of the genus Polaribacter. Int. J. Syst. Evol. Microbiol., 64, 973-978.
Original article.

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Polaribacter atrinae Hyun et al. 2014, sp. nov.
Type strain: (see also StrainInfo.net) WP25=KACC 17473=JCM 19202.
Sequence accession no. (16S rRNA) for the type strain: KC878325.
Whole-genome sequence accession no. for the type strain: N/A.
Etymology: N.L. gen. n. atrinae, of Atrina, the systematic name of a genus of comb pen shell, referring to the isolation of the type strain from Atrina pectinata.
Source: Animal.
Valid publication: HYUN, D.-W., SHIN, N.-R., KIM, M.-S., KIM, P. S., JUNG, M.-J., KIM, J. Y., WHON, T. W. and BAE, J.-W. 2014. Polaribacter atrinae sp. nov., isolated from the intestine of a comb pen shell, Atrina pectinata. Int. J. Syst. Evol. Microbiol., 64, 1654-1661.
Original article in IJSEM Online

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Polaribacter butkevichii Nedashkovskaya et al. 2006, sp. nov.
Type strain: (see also StrainInfo.net) KMM 3938 = KCTC 12100 = CCUG 48005.
Sequence accession no. (16S rRNA gene) for the type strain: AY189722.
Etymology: N.L. gen. masc. n. butkevichii, of Butkevich, named after V.S. Butkevich, Russian marine microbiologist.
Valid publication: Validation List no. 110. Int. J. Syst. Evol. Microbiol., 2006, 56, 1459-1460.
Effective publication: NEDASHKOVSKAYA (O.I.), KIM (S.B.), LYSENKO (A.M.), KALINOVSKAYA (N.I.), MIKHAILOV (V.V.), KIM (I.S.) and BAE (K.S.): Polaribacter butkevichii sp. nov., a novel marine mesophilic bacterium of the family Flavobacteriaceae. Curr. Microbiol., 2005, 51, 408-412.
Validation List no. 110 in IJSEM Online - Effective publication Online

Polaribacter butkevichii Nedashkovskaya et al. 2006 emend. Kim et al. 2013.
Reference: KIM, B.-C., OH, H. W., KIM, H., PARK, D.-S., HONG, S. G., LEE, H. K. and BAE, K. S. 2013. Polaribacter sejongensis sp. nov., isolated from Antarctic soil, and emended descriptions of the genus Polaribacter, Polaribacter butkevichii and Polaribacter irgensii. Int. J. Syst. Evol. Microbiol., 63, 4000-4005.
Original article in IJSEM Online

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Polaribacter dokdonensis Yoon et al. 2006, sp. nov.
Type strain: (see also StrainInfo.net) DSW-5 = DSM 17204 = KCTC 12392.
Sequence accession no. (16S rRNA gene) for the type strain: DQ004686.
Etymology: N.L. masc. adj. dokdonensis, pertaining to Dokdo, an island of Korea, from where the type strain was isolated.
Valid publication: YOON (J.H.), KANG (S.J.) and OH (T.K.): Polaribacter dokdonensis sp. nov., isolated from seawater. Int. J. Syst. Evol. Microbiol., 2006, 56, 1251-1255.
Original article in IJSEM Online

Polaribacter dokdonensis Yoon et al. 2006 emend. Fukui et al. 2013.
Type strain: (see also StrainInfo.net) DSW-5 = DSM 17204 = KCTC 12392.
Sequence accession no. (16S rRNA gene) for the type strain: DQ004686.
Etymology: N.L. masc. adj. dokdonensis, pertaining to Dokdo, an island of Korea, from where the type strain was isolated.
Reference: FUKUI (Y.), ABE (M.), KOBAYASHI (M.), SAITO (H.), OIKAWA (H.), YANO (Y.) and SATOMI (M.): Polaribacter porphyrae sp. nov., isolated from the red alga Porphyra yezoensis, and emended descriptions of the genus Polaribacter and two Polaribacter species. Int. J. Syst. Evol. Microbiol., 2013, 63, 1665-1672.
Original article in IJSEM Online

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Polaribacter filamentus Gosink et al. 1998, sp. nov. (Type species of the genus.)
Type strain: (see also StrainInfo.net) 215 = ATCC 700397= CIP 106479.
Sequence accession no. (16S rRNA gene) for the type strain: U73726.
Etymology: L. n. filum, thread; N.L. masc. adj. filamentus, threadlike, filamentous.
Valid publication: GOSINK (J.J.), WOESE (C.R.) and STALEY (J.T.): Polaribacter gen. nov., with three new species, P. irgensii sp. nov., P. franzmannii sp. nov. and P. filamentus sp. nov., gas vacuolate polar marine bacteria of the Cytophaga-Flavobacterium-Bacteroides group and reclassification of 'Flectobacillus glomeratus' as Polaribacter glomeratus comb. nov. Int. J. Syst. Bacteriol., 1998, 48, 223-235.
Original article in IJSEM Online

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Polaribacter franzmannii Gosink et al. 1998, sp. nov.
Type strain: (see also StrainInfo.net) 301 = ATCC 700399= CIP 106480.
Sequence accession no. (16S rRNA gene) for the type strain: U14586.
Etymology: N.L. gen. masc. n. franzmannii, of Franzmann, named in honor of Peter D. Franzmann, an Australian microbiologist and polar researcher.
Valid publication: GOSINK (J.J.), WOESE (C.R.) and STALEY (J.T.): Polaribacter gen. nov., with three new species, P. irgensii sp. nov., P. franzmannii sp. nov. and P. filamentus sp. nov., gas vacuolate polar marine bacteria of the Cytophaga-Flavobacterium-Bacteroides group and reclassification of 'Flectobacillus glomeratus' as Polaribacter glomeratus comb. nov. Int. J. Syst. Bacteriol., 1998, 48, 223-235.
Original article in IJSEM Online

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Polaribacter gangjinensis Lee et al. 2011, sp. nov.
Type strain: (see also StrainInfo.net) K17-16 = JCM 16152 = KCTC 22729.
Sequence accession no. (16S rRNA gene) for the type strain: FJ425213.
Etymology: N.L. masc. adj. gangjinensis, referring to Gangjin, the name of the bay in Korea from which the type strain was isolated.
Valid publication: LEE (Y.S.), LEE (D.H.), KAHNG (H.Y.), SOHN (S.H.) and JUNG (J.S.): Polaribacter gangjinensis sp. nov., isolated from seawater. Int. J. Syst. Evol. Microbiol., 2011, 61, 1425-1429.
Original article in IJSEM Online

Polaribacter gangjinensis Lee et al. 2011 emend. Fukui et al. 2013.
Type strain: (see also StrainInfo.net) K17-16 = JCM 16152 = KCTC 22729.
Sequence accession no. (16S rRNA gene) for the type strain: FJ425213.
Etymology: N.L. masc. adj. gangjinensis, referring to Gangjin, the name of the bay in Korea from which the type strain was isolated.
Reference: FUKUI (Y.), ABE (M.), KOBAYASHI (M.), SAITO (H.), OIKAWA (H.), YANO (Y.) and SATOMI (M.): Polaribacter porphyrae sp. nov., isolated from the red alga Porphyra yezoensis, and emended descriptions of the genus Polaribacter and two Polaribacter species. Int. J. Syst. Evol. Microbiol., 2013, 63, 1665-1672.
Original article in IJSEM Online

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Polaribacter glomeratus (McGuire et al. 1988) Gosink et al. 1998, comb. nov.
Type strain: (see also StrainInfo.net) ACAM 171 = ATCC 43844= CIP 103112 = LMG 13858 = UQM 3055.
Sequence accession no. (16S rRNA gene) for the type strain: M58775.
Basonym: ¤ Flectobacillus glomeratus McGuire et al. 1988.
Etymology: L. masc. part. adj. glomeratus, (from L. v. glomerare, to form into ball, glomerate), formed into a ball, glomerated.
Valid publication: GOSINK (J.J.), WOESE (C.R.) and STALEY (J.T.): Polaribacter gen. nov., with three new species, P. irgensii sp. nov., P. franzmannii sp. nov. and P. filamentus sp. nov., gas vacuolate polar marine bacteria of the Cytophaga-Flavobacterium-Bacteroides group and reclassification of 'Flectobacillus glomeratus' as Polaribacter glomeratus comb. nov. Int. J. Syst. Bacteriol., 1998, 48, 223-235.
Original article in IJSEM Online

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Polaribacter huanghezhanensis Li et al. 2014, sp. nov.
Type strain: (see also StrainInfo.net) SM1202=CCTCC AB 2013148=KCTC 32516.
Sequence accession no. (16S rRNA) for the type strain: KC793205.
Whole-genome sequence accession no. for the type strain: N/A.
Etymology: N.L. masc. adj. huanghezhanensis, of or belonging to Huánghé Zhàn, the Yellow River Station, the first Chinese Arctic station.
Source: Environmental - marine.
Valid publication: LI, H., ZHANG, X.-Y., LIU, C., LIN, C.-Y., XU, Z., CHEN, X.-L., ZHOU, B.-C., SHI, M. and ZHANG, Y.-Z. 2014. Polaribacter huanghezhanensis sp. nov., isolated from Arctic fjord sediment, and emended description of the genus Polaribacter. Int. J. Syst. Evol. Microbiol., 64, 973-978.
Original article in IJSEM Online

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Polaribacter irgensii Gosink et al. 1998, sp. nov.
Type strain: (see also StrainInfo.net) 23-P = ATCC 700398= CIP 106478.
Sequence accession no. (16S rRNA gene) for the type strain: M61002.
Etymology: L. gen. masc. n. irgensii, of Irgens, named in honor of Roar L. Irgens, the first microbiologist to observe polar marine gas vacuolate bacteria.
Valid publication: GOSINK (J.J.), WOESE (C.R.) and STALEY (J.T.): Polaribacter gen. nov., with three new species, P. irgensii sp. nov., P. franzmannii sp. nov. and P. filamentus sp. nov., gas vacuolate polar marine bacteria of the Cytophaga-Flavobacterium-Bacteroides group and reclassification of 'Flectobacillus glomeratus' as Polaribacter glomeratus comb. nov. Int. J. Syst. Bacteriol., 1998, 48, 223-235.
Original article in IJSEM Online

Polaribacter irgensii Gosink et al. 1998 emend. Kim et al. 2013.
Reference: KIM, B.-C., OH, H. W., KIM, H., PARK, D.-S., HONG, S. G., LEE, H. K. and BAE, K. S. 2013. Polaribacter sejongensis sp. nov., isolated from Antarctic soil, and emended descriptions of the genus Polaribacter, Polaribacter butkevichii and Polaribacter irgensii. Int. J. Syst. Evol. Microbiol., 63, 4000-4005.
Original article in IJSEM Online

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Polaribacter marinivivus Park et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) GYSW-15=CECT 8655=KCTC 42156.
Sequence accession no. (16S rRNA) for the type strain: KM017972.
Whole-genome sequence accession no. for the type strain: -.
Etymology: -.
Source: Environmental - marine.
Valid publication: Validation List no. 163. List of new names and new combinations previously effectively, but not validly, published. Int. J. Syst. Evol. Microbiol., 65 (2015), 1105-1111.
Validation List Online
Effective publication: PARK, S., PARK, J.-M., JUNG, Y.-T., LEE, K.-C., LEE, J.-S. and YOON, J.-H. 2014. Polaribacter marinivivus sp. nov., a member of the family Flavobacteriaceae isolated from seawater. Antonie van Leeuwenhoek, 106, 1139-1146.
Effective publication Online

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Polaribacter porphyrae Fukui et al. 2013, sp. nov.
Type strain: (see also StrainInfo.net) LNM-20 = LMG 26671 = NBRC 108759.
Sequence accession no. (16S rRNA gene) for the type strain: AB695286.
Etymology: N.L. gen. n. porphyrae, of Porphyra, from Porphyra yezoensis, the scientific name of the red alga from which the type strain was first isolated.
Valid publication: FUKUI (Y.), ABE (M.), KOBAYASHI (M.), SAITO (H.), OIKAWA (H.), YANO (Y.) and SATOMI (M.): Polaribacter porphyrae sp. nov., isolated from the red alga Porphyra yezoensis, and emended descriptions of the genus Polaribacter and two Polaribacter species. Int. J. Syst. Evol. Microbiol., 2013, 63, 1665-1672.
Original article in IJSEM Online

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Polaribacter reichenbachii Nedashkovskaya et al. 2013, sp. nov.
Type strain: (see also StrainInfo.net) 6Alg 8 = KCTC 23969 = LMG 26443.
Sequence accession no. (16S rRNA gene) for the type strain: HQ891656.
Etymology: N.L. gen. masc. n. reichenbachii, of Reichenbach, in honour to Han Reichenbach, the German microbiologist which made a great contribution in the investigation of bacteria belonging to the phylum Bacteroidetes.
Valid publication: Validation List no. 150. Int. J. Syst. Evol. Microbiol., 2013, 63, 797-798.
Effective publication: NEDASHKOVSKAYA (O.I.), KUKHLEVSKIY (A.D.) and ZHUKOVA (N.V.): Polaribacter reichenbachii sp. nov.: a new marine bacterium associated with the green alga Ulva fenestrata. Curr. Microbiol., 2013, 66, 16-21.
Validation List no. 150 in IJSEM Online - Effective publication Online

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Polaribacter sejongensis Kim et al. 2013, sp. nov.
Type strain: (see also StrainInfo.net) KOPRI 21160=KCTC 23670=JCM 18092.
Sequence accession no. (16S rRNA) for the type strain: HQ853596.
Etymology: N.L. masc. adj. sejongensis, of or belonging to Sejong, the name of the Antarctic station where the type strain was isolated.
Source: Environmental - soil.
Reference: KIM, B.-C., OH, H. W., KIM, H., PARK, D.-S., HONG, S. G., LEE, H. K. and BAE, K. S. 2013. Polaribacter sejongensis sp. nov., isolated from Antarctic soil, and emended descriptions of the genus Polaribacter, Polaribacter butkevichii and Polaribacter irgensii. Int. J. Syst. Evol. Microbiol., 63, 4000-4005.
Original article in IJSEM Online

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Polaribacter undariae Park et al. 2015, sp. nov.
Type strain: (see also StrainInfo.net) W-BA7=KCTC 42175=CECT 8670.
Sequence accession no. (16S rRNA) for the type strain: KM458974.
Etymology: N.L. gen. n. undariae, of Undaria, the generic name of the brown alga Undaria pinnatifida, from a reservoir of which the type strain was isolated.
Source: Environmental - freshwater.
Valid publication: PARK, S., PARK, J. M., JUNG, Y. T., LEE, K. H. and YOON, J. H. 2015. Polaribacter undariae sp. nov., isolated from a brown alga reservoir. Int. J. Syst. Evol. Microbiol., 65, 1679-1685.
Original article in IJSEM Online

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Polaribacter vadi Kim et al. 2017, sp. nov.
Type strain: (see also StrainInfo.net) LPB0003=KACC 18704=JCM 31217.
Sequence accession no. (16S rRNA) for the type strain: KT355267.
Whole-genome sequence accession no.: CP017477.
Etymology: L. neut. gen. n. vadi, of a shallow place in the sea.
Source: Animal.
Valid publication: KIM, E., SHIN, S. K., CHOI, S. and YI, H. 2017. Polaribacter vadi sp. nov., isolated from a marine gastropod. Int. J. Syst. Evol. Microbiol., 67, 144-147.
Original article in IJSEM Online

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