Name: Pelagibacterium Xu et al. 2011

Category: Genus

Proposed as: gen. nov.

Etymology: Pe.la.gi.bac.te.ri.um. L. neut. n. pelagus, the sea; N.L. neut. n. bacterium, a small rod; N.L. neut. n. Pelagibacterium, a rod isolated from the sea

Gender: neuter (stem: Pelagibacteri-)

Type species: Pelagibacterium halotolerans Xu et al. 2011

Conduct genome-based taxonomy of genus at TYGS

16S rRNA gene: Analyse FASTA

Valid publication: Xu XW, Huo YY, Wang CS, Oren A, Cui HL, Vedler E, Wu M. Pelagibacterium halotolerans gen. nov., sp. nov. and Pelagibacterium luteolum sp. nov., novel members of the family Hyphomicrobiaceae. Int J Syst Evol Microbiol 2011; 61:1817-1822.

IJSEM list: Euzeby JP. Notification list. Notification that new names and new combinations have appeared in volume 61, part 8 of the IJSEM. Int J Syst Evol Microbiol 2011; 61:2566-2567.

Nomenclatural status: validly published under the ICNP

Taxonomic status: correct name

• Notes:
  • 🧕 Xu et al. (2011) assigned this genus to the family Hyphomicrobiaceae Babudieri 1950 (Approved Lists 1980). Publication: Xu XW, Huo YY, Wang CS, Oren A, Cui HL, Vedler E, Wu M. Pelagibacterium halotolerans gen. nov., sp. nov. and Pelagibacterium luteolum sp. nov., novel members of the family Hyphomicrobiaceae. Int J Syst Evol Microbiol 2011; 61:1817-1822.
  • 😢 The terminology used by the authors is in line with many other taxonomic studies and does not negatively affect their main results; some improvements may nevertheless be possible. Contrasting the term "chemotaxonomic" with "phenotypic" is not recommended. Whether taxa can have "members" is debatable. See the LPSN phylogeny page for details. Publication: Göker M. What can genome analysis offer for bacteria? In: Bridge P, Smith D, Stackebrandt E (eds), Trends in the systematics of bacteria and fungi, CAB International, Wallingford, 2021, p. 255-281.
  • 🧬 The phylogenomic assignment score of this taxon is 0.07843 (N = 32).
  • 🎰 The BRCs most frequently used for deposits in this group are: CGMCC: 8; JCM: 5; KCTC: 5; MCCC: 4; CELMS: 1; NBRC: 1; DSM: 1.

Subdivision:

Number of child taxa with a validly published and correct name: 7
Number of child taxa with a validly published name, including synonyms: 7
Total number of child taxa: 11

• Child taxa:

  • Name	Nomenclatural status	Taxonomic status
    "Pelagibacterium flavum" Chen et al. 2024	not validly published	preferred name (not correct name)
    Pelagibacterium halotolerans Xu et al. 2011	validly published under the ICNP	correct name
    Pelagibacterium lacus Liu et al. 2019	validly published under the ICNP	correct name
    Pelagibacterium lentulum Wang et al. 2017	validly published under the ICNP	correct name
    "Pelagibacterium limicola" Wei et al. 2021	not validly published	preferred name (not correct name)
    "Pelagibacterium lixinzhangensis" Yang and Sun 2016	not validly published	preferred name (not correct name)
    Pelagibacterium luteolum Xu et al. 2011	validly published under the ICNP	correct name
    Pelagibacterium montanilacus Lu et al. 2018	validly published under the ICNP	correct name
    "Pelagibacterium nitratireducens" Li et al. 2013	not validly published	preferred name (not correct name)
    Pelagibacterium sediminicola Jang et al. 2019	validly published under the ICNP	correct name
    Pelagibacterium xiamenense He et al. 2022	validly published under the ICNP	correct name

Parent taxon: Devosiaceae Hördt et al. 2020

Assigned by: Hordt A, Lopez MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Goker M. Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria. Front Microbiol 2020; 11:468.

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Record number: 518115