Genus Marinobacterium

Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow () only indicates the sequence of valid publication of names and does not mean that the last name in the sequence must be used (see: Introduction).

Number of species cited in this file: 12
Number of subspecies cited in this file: 0

Classification (Warning: see also the file "Classification of prokaryotes: Introduction").

 

Marinobacterium González et al. 1997, gen. nov.
Type species: ¤ Marinobacterium georgiense González et al. 1997.
Etymology: L. adj. marinus, of the sea, marine; L. neut. n. bacterium, a small rod; N.L. neut. n. Marinobacterium, small marine rod.
Reference: GONZÁLEZ (J.M.), MAYER (F.), MORAN (M.A.), HODSON (R.E.) and WHITMAN (W.B.): Microbulbifer hydrolyticus gen. nov., sp. nov., and Marinobacterium georgiense gen. nov., sp. nov., two marine bacteria from a lignin-rich pulp mill waste enrichment community. Int. J. Syst. Bacteriol., 1997, 47, 369-376.
Original article in IJSEM Online

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Marinobacterium coralli Chimetto et al. 2011, sp. nov.
Type strain: (see also StrainInfo.net) strain R-40509 = CAIM 1449 = LMG 25435.
Sequence accession no. (16S rRNA gene) for the type strain: GU183820.
Etymology: L. gen. n. coralli, of coral, from which the organism was isolated.
Reference: CHIMETTO (L.A.), CLEENWERCK (I.), BROCCHI (M.), WILLEMS (A.), DE VOS (P.) and THOMPSON (F.L.): Marinobacterium coralli sp. nov., isolated from mucus of coral (Mussismilia hispida). Int. J. Syst. Evol. Microbiol., 2011, 61, 60-64.
Original article in IJSEM Online

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Marinobacterium georgiense González et al. 1997, sp. nov. (Type species of the genus.)
Type strain: (see also StrainInfo.net) strain KW-40 = ATCC 700074 = CIP 105236 = DSM 11526 = JCM 21667 = NBRC 102606.
Sequence accession no. (16S rRNA gene) for the type strain: U58339.
Etymology: N.L. neut. adj. georgiense, pertaining to Georgia, U.S.A.,  the place where the bacterium was first isolated.
Reference: GONZÁLEZ (J.M.), MAYER (F.), MORAN (M.A.), HODSON (R.E.) and WHITMAN (W.B.): Microbulbifer hydrolyticus gen. nov., sp. nov., and Marinobacterium georgiense gen. nov., sp. nov., two marine bacteria from a lignin-rich pulp mill waste enrichment community. Int. J. Syst. Bacteriol., 1997, 47, 369-376.
Original article in IJSEM Online

Marinobacterium georgiense González et al. 1997 emend. Satomi et al. 2002.
Type strain: (see also StrainInfo.net) strain KW-40 = ATCC 700074 = CIP 105236 = DSM 11526 = JCM 21667 = NBRC 102606.
Sequence accession no. (16S rRNA gene) for the type strain: U58339.
Etymology: N.L. neut. adj. georgiense, pertaining to Georgia, U.S.A.,  the place where the bacterium was first isolated.
Reference: SATOMI (M.), KIMURA (B.), HAMADA (T.), HARAYAMA (S.) and FUJII (T.): Phylogenetic study of the genus Oceanospirillum based on 16S rRNA and gyrB genes: emended description of the genus Oceanospirillum, description of Pseudospirillum gen. nov., Oceanobacter gen. nov. and Terasakiella gen. nov. and transfer of Oceanospirillum jannaschii and Pseudomonas stanieri to Marinobacterium as Marinobacterium jannaschii comb. nov. and Marinobacterium stanieri comb. nov. Int. J. Syst. Evol. Microbiol., 2002, 52, 739-747.
Original article in IJSEM Online

Note: Marinobacterium georgiense and ¤ Pseudomonas iners are unified as Marinobacterium georgiense González et al. 1997 emend. Satomi et al. 2002 [Rule 44].

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Marinobacterium halophilum Chang et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) strain mano11 = DSM 17586 = KCTC 12240.
Sequence accession no. (16S rRNA gene) for the type strain: AY563030.
Etymology: Gr. n. hals halos, salt; N.L. adj. philus -a -um (from Gr. adj. philos -ê -on), friend, loving; N.L. neut. adj. halophilum, salt-loving.
Reference: CHANG (H.W.), NAM (Y.D.), KWON (H.Y.), PARK (J.R.), LEE (J.S.), YOON (J.H.), AN (K.G.) and BAE (J.W.): Marinobacterium halophilum sp. nov., a marine bacterium isolated from the Yellow Sea. Int. J. Syst. Evol. Microbiol., 2007, 57, 77-80.
Original article in IJSEM Online

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Marinobacterium jannaschii (Bowditch et al. 1984) Satomi et al. 2002, comb. nov.
Type strain: (see also StrainInfo.net) strain 207 = ATCC 27135 = CIP 103444 = DSM 6295 = IFO (now NBRC) 15466 = LMG 6239.
Sequence accession no. (16S rRNA gene) for the type strain: AB006765.
Basonym: ¤ Oceanospirillum jannaschii Bowditch et al. 1984.
Etymology: N.L. gen. masc. n. jannaschii, of Jannasch; named after H.W. Jannasch.
Reference: SATOMI (M.), KIMURA (B.), HAMADA (T.), HARAYAMA (S.) and FUJII (T.): Phylogenetic study of the genus Oceanospirillum based on 16S rRNA and gyrB genes: emended description of the genus Oceanospirillum, description of Pseudospirillum gen. nov., Oceanobacter gen. nov. and Terasakiella gen. nov. and transfer of Oceanospirillum jannaschii and Pseudomonas stanieri to Marinobacterium as Marinobacterium jannaschii comb. nov. and Marinobacterium stanieri comb. nov. Int. J. Syst. Evol. Microbiol., 2002, 52, 739-747.
Original article in IJSEM Online

Note: According to Rules 27(3) and 30, this name is not validly published because the effective publication only documents deposit of the type strain in a single recognized culture collection. However, according to the Judicial Opinion 81, Marinobacterium jannaschii (Bowditch et al. 1984) Satomi et al. 2002 is to be considered to be validly published.
References:
1 EUZÉBY (J.P.) and TINDALL (B.J.): Status of strains that contravene Rules 27(3) and 30 of the Bacteriological Code. Request for an Opinion. Int. J. Syst. Evol. Microbiol., 2004, 54, 293-301.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: Status of strains that contravene Rules 27 (3) and 30 of the International Code of Nomenclature of Bacteria. Opinion 81. Int. J. Syst. Evol. Microbiol., 2008, 58, 1755-1763.
Opinion 81 in IJSEM Online

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Marinobacterium litorale Kim et al. 2007, sp. nov.
Type strain: (see also StrainInfo.net) strain IMCC1877 = KCTC 12756 = LMG 23872.
Sequence accession no. (16S rRNA gene) for the type strain: DQ917760.
Etymology: L. neut. adj. litorale, of the seashore, a shallow-seawater dweller.
Reference: KIM (H.), CHOO (Y.J.), SONG (J.), LEE (J.S.), LEE (K.C.) and CHO (J.C.): Marinobacterium litorale sp. nov., in the order Oceanospirillales. Int. J. Syst. Evol. Microbiol., 2007, 57, 1659-1662.
Original article in IJSEM Online

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Marinobacterium lutimaris Kim et al. 2010, sp. nov.
Type strain: (see also StrainInfo.net) strain AN9 = DSM 22012 = KACC 13703.
Sequence accession no. (16S rRNA gene) for the type strain: FJ230839.
Etymology: L. n. lutum, mud; L. gen. n. maris, of the sea; N.L. gen. n. lutimaris, of sea mud.
Reference: KIM (J.M.), LEE (S.H.), JUNG (J.Y.) and JEON (C.O.): Marinobacterium lutimaris sp. nov., isolated from a tidal flat. Int. J. Syst. Evol. Microbiol., 2010, 60, 1828-1831.
Original article in IJSEM Online

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Marinobacterium marisflavi Kim et al. 2014, sp. nov.
Type strain: (see also StrainInfo.net) IMCC4074=KCTC 12757=LMG 24660=NBRC 104634.
Sequence accession no. (16S rRNA) for the type strain: EF468717.
Whole-genome sequence accession no. for the type strain: N/A.
Etymology: L. gen. neut. n. maris, of the sea; L. neut. adj. flavum, yellow; N.L. gen. n. marisflavi, of the Yellow Sea.
Source: Environmental - marine.
Valid publication: VALIDATION LIST no. 155. List of new names and new combinations previously effectively, but not validly, published. Int. J Syst. Evol. Microbiol., 64 (2014), 1-5.
Validation List Online
Effective publication: KIM, H., OH, H.-M., YANG, S.-J., LEE, J.-S., HONG, J.-S. and CHO, J.-C. 2009. Marinobacterium marisflavi sp. nov., isolated from a costal seawater. Curr. Microbiol., 58, 511-515.
Effective publication Online

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Marinobacterium maritimum Kim et al. 2009, sp. nov.
Type strain: (see also StrainInfo.net) strain AR11 = AR-11 = JCM 15134 = KCTC 22254.
Sequence accession no. (16S rRNA gene) for the type strain: EU399548.
Etymology: L. neut. adj. maritimum, of or belonging to the sea, maritime.
Reference: KIM (S.J.), PARK (S.J.), YOON (D.N.), PARK (B.J.), CHOI (B.R.), LEE (D.H.), ROH (Y.) and RHEE (S.K.): Marinobacterium maritimum sp. nov., a marine bacterium isolated from Arctic sediment. Int. J. Syst. Evol. Microbiol., 2009, 59, 3030-3034.
Original article in IJSEM Online

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Marinobacterium nitratireducens Huo et al. 2009, sp. nov.
Type strain: (see also StrainInfo.net) strain CN44 = CGMCC 1.7286 = JCM 15523.
Sequence accession no. (16S rRNA gene) for the type strain: EU573965.
Etymology: N.L. n. nitras -atis, nitrate; L. part. adj. reducens, leading back, bringing back and in chemistry converting to a different oxidation state; N.L. part. adj. nitratireducens, reducing nitrate.
Reference: HUO (Y.Y.), XU (X.W.), CAO (Y.), WANG (C.S.), ZHU (X.F.), OREN (A.) and WU (M.): Marinobacterium nitratireducens sp. nov. and Marinobacterium sediminicola sp. nov., isolated from marine sediment. Int. J. Syst. Evol. Microbiol., 2009, 59, 1173-1178.
Original article in IJSEM Online

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Marinobacterium rhizophilum Kim et al. 2008, sp. nov.
Type strain: (see also StrainInfo.net) strain CL-YJ9 = DSM 18822 = KCCM 42386.
Sequence accession no. (16S rRNA gene) for the type strain: EF192391.
Etymology: Gr. n. rhiza, root; N.L. adj. philus -a -um (from Gr. adj. philos -ê -on), friend, loving; N.L. neut. adj. rhizophilum, root-loving.
Reference: KIM (Y.G.), JIN (Y.A.), HWANG (C.Y.) and CHO (B.C.): Marinobacterium rhizophilum sp. nov., isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica. Int. J. Syst. Evol. Microbiol., 2008, 58, 164-167.
Original article in IJSEM Online

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Marinobacterium sediminicola Huo et al. 2009, sp. nov.
Type strain: (see also StrainInfo.net) strain CN47 = CGMCC 1.7287 = JCM 15524.
Sequence accession no. (16S rRNA gene) for the type strain: EU573966.
Etymology: L. n. sedimen -inis, sediment; L. suff. -cola (from L. n. incola), inhabitant, dweller; N.L. n. sediminicola, sediment dweller.
Reference: HUO (Y.Y.), XU (X.W.), CAO (Y.), WANG (C.S.), ZHU (X.F.), OREN (A.) and WU (M.): Marinobacterium nitratireducens sp. nov. and Marinobacterium sediminicola sp. nov., isolated from marine sediment. Int. J. Syst. Evol. Microbiol., 2009, 59, 1173-1178.
Original article in IJSEM Online

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Marinobacterium stanieri (Baumann et al. 1983) Satomi et al. 2002, comb. nov.
Type strain: (see also StrainInfo.net) strain 146 = ATCC 27130 = CCUG 16021 = CIP 106697 = DSM 7027 = LMG 6847.
Sequence accession no. (16S rRNA gene) for the type strain: AB021367.
Basonym: ¤ Pseudomonas stanieri Baumann et al. 1983.
Etymology: N.L. gen. masc. n. stanieri, of Stanier, named after R. Y. Stanier, a Canadian microbiologist who made extensive contributions to general microbiology and, in particular, to Pseudomonas.
Reference: SATOMI (M.), KIMURA (B.), HAMADA (T.), HARAYAMA (S.) and FUJII (T.): Phylogenetic study of the genus Oceanospirillum based on 16S rRNA and gyrB genes: emended description of the genus Oceanospirillum, description of Pseudospirillum gen. nov., Oceanobacter gen. nov. and Terasakiella gen. nov. and transfer of Oceanospirillum jannaschii and Pseudomonas stanieri to Marinobacterium as Marinobacterium jannaschii comb. nov. and Marinobacterium stanieri comb. nov. Int. J. Syst. Evol. Microbiol., 2002, 52, 739-747.
Original article in IJSEM Online

Note: According to Rules 27(3) and 30, this name is not validly published because the effective publication only documents deposit of the type strain in a single recognized culture collection. However, according to the Judicial Opinion 81, Marinobacterium stanieri (Baumann et al. 1983) Satomi et al. 2002 is to be considered to be validly published.
References:
1 EUZÉBY (J.P.) and TINDALL (B.J.): Status of strains that contravene Rules 27(3) and 30 of the Bacteriological Code. Request for an Opinion. Int. J. Syst. Evol. Microbiol., 2004, 54, 293-301.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: Status of strains that contravene Rules 27 (3) and 30 of the International Code of Nomenclature of Bacteria. Opinion 81. Int. J. Syst. Evol. Microbiol., 2008, 58, 1755-1763.
Opinion 81 in IJSEM Online

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